User:Igenes/sandbox
Rough Outline For Cotransporter Article[edit]
- 1. Introduction
- 2. Background
- 3. Structures & Composition
- 4. Mechanism
- Antiporters vs Symporters
- 5 Examples of Cotransporters
- Na+/glucose cotransporter (SGLT1) - is also known as sodium-glucose cotransporter 1 and are encoded by the SLC5A1 gene. SGLT1 is an electrogenic transporter as sodium electrochemical gradient drives glucose uphill into the cells. SGLT1 is a high affinity Na+ /glucose cotransporter that have an important role in transferring sugar across the epithelial cells of renal proximal tubule and of the intestine, in particular the small intestine.
- Na+/phosphate cotransporter (NaPi) - Sodium-phosphate cotransporters are from SLC34 and SLC20 family. They are also found across the epithelial cells of renal proximal tubule and of the small intestine. It transfers inorganic phosphate into cells through active transport with the help of Na+ gradient. Simialar to SGTL1, they are classified as electrogenic transporters. NaPi couples by 3 Na+ ions and 1 divalent Pi, they classified as NaPi IIa and NaPi IIb. NaPi that couples with 2 Na+ and 1 divalent Pi are classified as NaPi IIc.
- Na+/I- symporter (NIS) - Sodium-Iodide is a type of symporter that is responsible for transferring iodide in the thyroid gland. NIS is primarly found in cells of the thyroid gland and also in the mammary glands. They are located on the basolateral membrane of thryroid follicular cells where 2 Na+ ions and 1 I- ion is coupled to transfer the iodide. NIS activity helps in the diagnosis and treatment of thyroid disease, including the highly successful treatment of thyroid cancer with radioiodide after thyroidectomy.
- Na+/K+/2Cl- cotransporter (NKCC) -
- GABA transporter (GAT) - neurotransmitter γ-aminobutyric acid (GABA) transporter are members of the solute carrier family 6 (SLC6) of sodium- and chloride-dependent neurotransmitter receptor transporters that is located in the plasma membrane and regulate the concentration of GABA in the synaptic cleft. The SLC6A1 gene encodes for GABA transporters.
- H+/oligopeptide transporter (PepT) -
- Sodium-coupled bicarbonate cotransporters (NBC) -
- 6. Malfunction
- Examples of conditions results from mutations
Transporter Symbols/Names | Relevant Diseases |
---|---|
4F2HC, SLC3A2 | Lysinuria |
ABC-1, ABC1 | Tangiers disease |
ABC7, hABC7 | X-linked sideroblastic anemia |
ABCR | Stargardt disease, Fundus flavimaculatus |
AE1, SLC4A1 | elliptocytosis, ovalocytosis, hemolytic anemia, spherocytosis, renal tubular acidosis |
AE2, SLC4A2 | congenital chloroidorrhea |
AE3, SLC4A3 | congenital chloroidorrhea |
ALDR | Adrenoleukodystrophy |
ANK | ankylosis (calcification); arthritis accompanied by mineral deposition, formation of bony outgrowths, and joint destruction |
Aralar-like, SLC25A13 | adult-onset type II citrullinemia |
ATBo, SLC1A5, hATBo, ASCT2, AAAT | Neurodegeneration |
BCMP1, UCP4, SLC25A14 | HHH |
CFTR | Cystic fibrosis |
CTR-1, SLC31A1 | Menkes/Wilsons disease |
CTR-2, SLC31A2 | Menkes/Wilsons disease, X-linked hypophosphatemia |
DTD, SLC26A2 | chondrodysplasias/ diadtrophic dysplasia |
EAAT1, SLC1A3, GLAST1 | Neurodegeneration, Amyotrophic lateral sclerosis |
EAAT2, SLC1A2, GLT-1 | Neurodegeneration, Dicarboxylic aminoaciduria |
EAAT3, SLC1A1, EAAC1 | Neurodegeneration |
EAAT4, SLC1A6 | Neurodegeneration |
EAAT5, SLC1A7 | Neurodegeneration |
FIC1 | Progressive familial intrahepatic cholestasis |
FOLT, SLC19A1, RFC1 | Folate malabsorption/megaloblastic anemia |
GLUT1, SLC2A1 | low CNS glucose causing seizures, Fanconi-Bickel syndrome, Glycogen storage disease type Id, Non-insulin-dependent diabetes mellitus, defect in glucose transport across the blood-brain barrier |
GLUT2, SLC2A2 | low CNS glucose causing seizures, Fanconi-Bickel syndrome, Glycogen storage disease type Id, Non-insulin-dependent diabetes mellitus (NIDDM) |
GLUT3, SLC2A3 | low CNS glucose causing seizures, Fanconi-Bickel syndrome, Glycogen storage disease type Id, Non-insulin-dependent diabetes mellitus (NIDDM) |
GLUT4, SLC2A4 | low CNS glucose causing seizures, Fanconi-Bickel syndrome, Glycogen storage disease type Id, Non-insulin-dependent diabetes mellitus (NIDDM) |
GLUT5, SLC2A5 | Isolated fructose malabsorption |
HET | anemia, genetic hemochromatosis |
HTT, SLC6A4 | anxiety-related traits |
LAT-2, SLC7A6 | Lysinuric protein intolerance |
LAT-3, SLC7A7 | lysinuric protein intolerance |
MDR1 | human cancers |
MDR2, MDR3 | Familia intrahepatic cholestasis |
MRP1 | human cancers |
NBC | Down’s syndrome |
NBC1, SLC4A4 | renal tubular acidosis |
NBC3, SLC4A7 | congenital hypothyroidism |
NCCT, SLC12A3, TSC | Gitelman syndrome |
NHE2, SLC9A2 | Microvillus inclusion disease |
NHE3, SLC9A3/3P | Microvillus inclusion disease |
NIS, SLC5A5 | congenital hypothyroidism |
NKCC1, SLC12A2 | gitelman’s syndrome |
NKCC2, SLC12A1 | Bartter’s syndrome |
NORTR | DiGeorge syndrome, velocardiofacial syndrome |
NRAMP2, DCT1, SLC11A2, | attention-deficit disorder |
NTCP2, ISBT, SLC10A2 | primary bile acid malabsorption (PBAM) |
OCTN2, SLC22A5 | systemic carnitine deficiency (progressive cardiomyopathy, skeletal myopathy, hypoglycaemia, hyperammonaemia, sudden infant death syndrome) |
ORNT1, SLC25A15 | HHH |
PMP34, SLC25A17 | Graves’ disease |
rBAT, SLC3A1, D2 | cystinuria |
SATT, SLC1A4, ASCT1 | Neurodegeneration |
SBC2 | hypocitraturia |
SERT | various mental disorders |
SGLT1, SLC5A1 | renal glucosuria / glucose-galactose malabsorption |
SGLT2, SLC5A2 | renal glucosuria |
SMVT, SLC5A6 | anxiety-related traits, depression |
TAP1 | juvenile onset psriasis |
y+L | Type I ystinuria |
- 7. Summary Conclusions
- 8. Reference
Proposed References[edit]
By Sridenour
Hattori, T., Wang, P. (2006). Involvement of Na+-K+-2Cl- Cotransporters in Hypertonicity-Induced Rise in Intracellular Calcium Concentration. Intern. J. Neuroscience. 116: 1501-1507.
- Discusses how activation of transport channels requires depolarization of the cell membrane. Obtained through JHU library so did not want to attach the PDF since access is limited to students and employees.
Lionetta, M.G., Chettino, T. (2006). The Na+-K-2Cl- cotransporter and the osmotic stress response in a model salt transport epithelium. Acta Physiol. 187: 115-124.
- Talks about this specific contransport channel and its role in maintaining the water and electrolyte content of the cell. Obtained through JHU library so did not want to attach the PDF since access is limited to students and employees.
Werner, A., Dehmelt, L., Nalbant, P. (1998). Na+-Dependent Phosphate Cotransporters: The NaPi Protein Families. The Journal of Experimental Biology. 201: 3135-3142. [1]
- Talks about the specific families of Na+/Pi contransporters.
Hubner, C.A., Jentsch, T.J. (2002). Ion Channel Diseases. Human Molecular Genetics. 11(20): 2435-2445 [2]
- Has a good list of diseases caused by defects within various channels.
Berridge, M.J. (2012). Cell Signalling Biology; doi:10.1042/csb0001003 [3]
- Great website discussing in depth all various types of ion channels. Has various sections devoted to specific cotransporters. May also be able to take some pictures from this page but I need to review the copyright availability first before posting them.
Proposed References[edit]
By Lutyeus
Lodish, H., Berk, A., Amon, A., Bretscher, A., Kaiser, C., Kriefer, M., et al. (2013). Molecular Cell Biology (7th ed.). New York: W.H. Freeman and Co..
- Page 476 has a simple definition
- Page 502 compares cotransporters with uniporters
- many, many good visualizations, just will need to site correctly
Gao, X., Zhou, L., Jiao, X., Lu, F., Yan, C., Zeng, X., et al. (2010). Mechanism Of Substrate Recognition And Transport By An Amino Acid Antiporter. Nature, 463(7282), 828-832. here
- Describes how substrate recognition occurs before any conformational changes are possible allowing for cotransport
Gao, X., Lu, F., Zhou, L., Dang, S., Sun, L., Li, X., et al. (2009). Structure And Mechanism Of An Amino Acid Antiporter. Science, 324(5934), 1565-1568. here
- Describes the mechanism of action and general structure of antiporters which are a type of cotransporter
Wright, E. (2001). Renal Na+ -glucose cotransporters. American Journal of Physiology - Renal Physiology, 280(F) 10-18.here
- talks about sodium/glucose cotransporters in renal cells
- covers protein structure
- gene information
- transport mechanisms
- good visuals
Haas, M. (1994). The Na-K-Cl cotransporters. American Journal of Physiology - Cell Physiology, 267(C) 869-885. here
- very important mechanism many cells, particularly muscle cells
- covers mechanism
- general structure of Na-K-Cl cotransporters, not just a specific one, this is very useful for us
- methods of regulation, which include protein kinases and phosphatates
- primary and secondary cotransport activation
- signalling
Possible Images[edit]
By Lutyeus
- this is a nice image but I have seen it all over the place and can't find any information on if it is copyrighted...
- not the best image but already available in wikimedia commons
- excellent .gif demonstrating a sympoter
- already on wikimedia commons
- only problem is the very beginning is in another language
By Harshil
- Has pictures and videos of cell membrane
- Picture of the gene SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7, Homo sapiens
By Sonya
- Has a great picture of the six secondary active cotransporters
I also found this one already uploaded in wikimedia commons and thought it is a pretty basic picture of the three types of transporters.
Proposed References[edit]
By Harshil
1) http://www.infosources.org/what_is/Robert_K._Crane.html
- - About Robert K Crane - who discovered the cotransport system, can go under Background section of the topic.
2) Édith Gagnon, Biff Forbush, Luc Caron, & Paul Isenring, 2003, Functional comparison of renal Na-K-Cl cotransporters between distant species, Vol. 284, American Journal of Physiology, Cell Physiology Published, pp. 365-370.
- - Article on comparing the cotransporters among different species.
3) http://omim.org/entry/603353
- - Information on Sodium bicarbonate cotransporter
4) Maa-Ohui Quarmyne, Mary Risinger, Andrew Linkugel, Anna Frazier, & Clinton Joiner, 2011, Defining A Phenotype for Red Cel Volume Regualtion and Potassium Chloride Cotransport, Vol 47, No. 2, Blood Cells Mol Dis, pp 95-99.
- - Information on Potassium Chloride cotranspoter
5) Naomi Mizuno, Takuro Niwa, Yoshihisa Yotsumoto, & Yuichi Sugiyama, 2003, Impact of Drug Transporter Studies on Drug Discovery and Development, Vol. 55, No. 3, Pharmacological reviews, The American Society for Pharmacology and Experimental Therapeutics, pp.425-461.
- - Application of cotransporter, this article has information on durg delivery through cotransporter.
6) Blaustein, Mordecai, 1984, Sodium transport and hypertension. Where we going?, Vol. 6 No. 4, Hypertension, American Heart Association, pp.445-453.
- - Topic on the sodium cotransporter assocaited with hypertension.
7) Ellory, J.C. and Stweart, G.W.,1982, The Human Erythrocyte C1-Dependent Na-K Cotransport System As A Possible Model Foe Studying The Action Of Loop Diuretics,Vol.75, British Journal of Pharmacology, pp. 183–188.
- - Supporting article to hypertension and cotranporter.
8) Kirk L. Hamilton, 2013, RobertK.Crane—Na+-glucosecotransportertocure?, March, Vol. 4, Article 53, Frontiers in Physiology, pp.1-5.
- - Has information on Robert K Crane - discovery of cotransport.